STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_7000159Sodium hydrogen exchanger. (505 aa)    
Predicted Functional Partners:
BKCO1_5600020
Calcineurin subunit b.
   
 0.537
BKCO1_2000057
Calmodulin; Belongs to the calmodulin family.
   
 0.537
BKCO1_3000016
Zn 2cys6 transcription factor protein.
   
 0.537
BKCO1_5100045
Ef-hand superfamily ca2+-modulated protein.
   
 0.537
BKCO1_370008
Neuronal calcium sensor 1.
   
 0.537
BKCO1_2500027
Calmodulin.
   
 0.537
BKCO1_1700028
Calcium-binding ef-hand protein.
   
 0.537
BKCO1_18000108
Uncharacterized protein.
   
 0.537
BKCO1_7000219
Myosin regulatory light chain cdc4.
   
 0.537
BKCO1_1000358
Cell division control protein cdc31.
   
 0.537
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.