STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_90001585-oxoprolinase (Atp-hydrolysing). (1370 aa)    
Predicted Functional Partners:
BKCO1_8000010
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
     
 0.895
BKCO1_130008
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.756
BKCO1_370005
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.756
BKCO1_4400096
Glutamate synthase.
     
 0.749
BKCO1_4500053
Cytosolic nonspecific dipeptidase.
    
 0.537
BKCO1_220002
Isochorismatase domain-containing protein.
    
  0.527
BKCO1_1000328
Pyrazinamidase nicotinamidase.
    
  0.527
BKCO1_4800021
Wd repeat protein.
    
 0.497
BKCO1_3800075
Gamma-glutamyltranspeptidase.
    
 0.473
BKCO1_27000113
Gamma-glutamyltranspeptidase.
    
 0.473
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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