STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_800025Nb-arc and tpr domain protein. (967 aa)    
Predicted Functional Partners:
BKCO1_100059
Uncharacterized protein.
    
 0.810
BKCO1_1600051
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.810
BKCO1_1150006
Aur protein kinase; Belongs to the protein kinase superfamily.
   
 0.795
BKCO1_3900014
Ste20-like serine threonine-protein kinase-like.
   
 0.795
BKCO1_7200032
Chromosome segregation protein.
   
 0.752
MDE1
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).
    
 0.617
BKCO1_2700053
Ran gtpase activating protein 1.
   
 
 0.564
BKCO1_170001
Uncharacterized protein.
   
 
 0.564
BKCO1_210002
Nadh dehydrogenase 1 beta subcomplex 9; Belongs to the complex I LYR family.
    
   0.528
BKCO1_3700021
Nadh-ubiquinone oxidoreductase subunit.
   
   0.520
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.