STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_4000123Glycoside hydrolase family 31 protein; Belongs to the glycosyl hydrolase 31 family. (668 aa)    
Predicted Functional Partners:
BKCO1_3300045
Protein kinase c substrate.
 
 
 0.933
BKCO1_1100072
Glycoside hydrolase family 63 protein.
   
 0.767
BKCO1_1500013
Proteophosphoglycan 5.
    
  0.729
BKCO1_190003
Calnexin.
    
 0.666
BKCO1_5000179
Protein disulfide-isomerase.
   
 0.566
BKCO1_8000225
Oligosaccharyl transferase subunit.
    
 0.558
BKCO1_19000160
Nuclease domain-containing protein 1.
   
    0.539
BKCO1_3700043
Glycosyltransferase family 24 protein.
   
 
 0.530
BKCO1_3800072
Ire protein kinase.
    
 0.510
BKCO1_2300073
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.510
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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