STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_300088D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (476 aa)    
Predicted Functional Partners:
BKCO1_3800024
Phosphoserine aminotransferase.
  
 0.990
BKCO1_3100018
Tryptophan synthase.
  
 0.949
BKCO1_1000342
Tryptophan synthase.
  
 0.949
BKCO1_4500013
Uridine cytidine kinase.
     
 0.902
BKCO1_2100097
Uncharacterized protein.
    
 0.897
BKCO1_2900048
Alanine-glyoxylate aminotransferase.
  
 
 0.825
BKCO1_3000271
Phosphoserine phosphatase.
  
 0.808
BKCO1_5300073
Acetolactate synthase i iii small subunit.
  
 
 0.806
BKCO1_11800010
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.777
BKCO1_2000160
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.777
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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