STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_2000243Cat eye syndrome critical region protein 5. (484 aa)    
Predicted Functional Partners:
BKCO1_600024
Glycerophosphodiester phosphodiesterase gde1.
   
 0.954
BKCO1_3300083
Alpha beta hydrolase fold-1 protein.
  
 
 0.953
BKCO1_1300044
Epoxide hydrolase.
  
 
 0.953
BKCO1_33000104
Alpha beta hydrolase.
  
 
 0.953
BKCO1_1000644
Alpha beta hydrolase.
  
 
 0.953
BKCO1_8300036
Alpha beta hydrolase fold-1 protein.
  
 
 0.953
BKCO1_3200043
Epoxide hydrolase.
  
 
 0.953
BKCO1_23000108
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
   
 0.928
BKCO1_3000174
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
    
 0.909
BKCO1_5100041
Had superfamily phosphatase.
  
 
 0.907
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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