STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_1000358Cell division control protein cdc31. (227 aa)    
Predicted Functional Partners:
BKCO1_300024
Leucine permease transcriptional regulator.
    
 
 0.988
BKCO1_2600095
Dna repair protein rad4.
    
 0.929
BKCO1_12000180
Xeroderma pigmentosum group c-complementing protein.
    
 0.929
BKCO1_37000101
Cop9 signalosome complex subunit 12.
    
 
 0.913
BKCO1_5800055
Uncharacterized protein.
    
   0.898
BKCO1_1180001
Uv excision repair protein rad23.
   
 0.882
BKCO1_2000020
Dynein heavy chain.
    
 0.870
BKCO1_5400071
Cytoplasmic dynein 1 intermediate chain 2.
    
 0.816
BKCO1_2100018
Actin actin-like protein; Belongs to the actin family.
    
 0.816
BKCO1_17000129
Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.
   
 0.804
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.