Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BKCO1_1000371 | BKCO1_1000645 | A0A1J9SLC3 | A0A1J9S6L0 | C2h2 finger domain. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.571 |
BKCO1_1000371 | BKCO1_11000135 | A0A1J9SLC3 | A0A1J9SA80 | C2h2 finger domain. | Uncharacterized protein. | 0.805 |
BKCO1_1000371 | BKCO1_23000124 | A0A1J9SLC3 | A0A1J9R2C0 | C2h2 finger domain. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.745 |
BKCO1_1000371 | BKCO1_250003 | A0A1J9SLC3 | A0A1J9QYE7 | C2h2 finger domain. | Chromatin remodeling complex subunit. | 0.582 |
BKCO1_1000371 | BKCO1_340009 | A0A1J9SLC3 | A0A1J9QVK8 | C2h2 finger domain. | Rna polymerase iii transcription factor subunit. | 0.563 |
BKCO1_1000371 | BKCO1_4000027 | A0A1J9SLC3 | A0A1J9QT67 | C2h2 finger domain. | Nitrate reductase. | 0.739 |
BKCO1_1000371 | BKCO1_4300085 | A0A1J9SLC3 | A0A1J9QU90 | C2h2 finger domain. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.568 |
BKCO1_1000371 | BKCO1_4400026 | A0A1J9SLC3 | A0A1J9QTU2 | C2h2 finger domain. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.579 |
BKCO1_1000371 | BKCO1_5000247 | A0A1J9SLC3 | A0A1J9RZH2 | C2h2 finger domain. | Rna polymerase iii transcription factor tfiiic subunit tfc4. | 0.607 |
BKCO1_1000371 | BKCO1_820001 | A0A1J9SLC3 | A0A1J9RN84 | C2h2 finger domain. | Ankyrin repeat and protein kinase domain-containing protein 1. | 0.617 |
BKCO1_1000645 | BKCO1_1000371 | A0A1J9S6L0 | A0A1J9SLC3 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | C2h2 finger domain. | 0.571 |
BKCO1_1000645 | BKCO1_11000135 | A0A1J9S6L0 | A0A1J9SA80 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Uncharacterized protein. | 0.497 |
BKCO1_1000645 | BKCO1_250003 | A0A1J9S6L0 | A0A1J9QYE7 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Chromatin remodeling complex subunit. | 0.485 |
BKCO1_1000645 | BKCO1_4400026 | A0A1J9S6L0 | A0A1J9QTU2 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.991 |
BKCO1_11000135 | BKCO1_1000371 | A0A1J9SA80 | A0A1J9SLC3 | Uncharacterized protein. | C2h2 finger domain. | 0.805 |
BKCO1_11000135 | BKCO1_1000645 | A0A1J9SA80 | A0A1J9S6L0 | Uncharacterized protein. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.497 |
BKCO1_11000135 | BKCO1_820001 | A0A1J9SA80 | A0A1J9RN84 | Uncharacterized protein. | Ankyrin repeat and protein kinase domain-containing protein 1. | 0.628 |
BKCO1_23000124 | BKCO1_1000371 | A0A1J9R2C0 | A0A1J9SLC3 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | C2h2 finger domain. | 0.745 |
BKCO1_23000124 | BKCO1_4000027 | A0A1J9R2C0 | A0A1J9QT67 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate reductase. | 0.978 |
BKCO1_23000124 | BKCO1_820001 | A0A1J9R2C0 | A0A1J9RN84 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Ankyrin repeat and protein kinase domain-containing protein 1. | 0.406 |
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