STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX39_19765Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (723 aa)    
Predicted Functional Partners:
IX39_19745
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.582
IX39_19760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.574
IX39_03125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.546
IX39_18315
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.543
IX39_19755
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.541
IX39_20590
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.517
IX39_18735
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
IX39_01305
Ferric siderophore ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.473
IX39_01375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.473
IX39_01405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.473
Your Current Organism:
Chryseobacterium formosense
NCBI taxonomy Id: 236814
Other names: C. formosense, CCUG 49271, CIP 108367, Chryseobacterium formosense Young et al. 2005 emend. Hahnke et al. 2016, Chryseobacterium sp. CC-H3-2, DSM 17452, strain CC-H3-2
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.