Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA73896.1 | SFA73917.1 | SAMN04489723_101121 | SAMN04489723_101122 | Acyl-CoA dehydrogenase. | Hypothetical protein. | 0.564 |
SFA73896.1 | SFA73944.1 | SAMN04489723_101121 | SAMN04489723_101123 | Acyl-CoA dehydrogenase. | Hypothetical protein. | 0.502 |
SFA73896.1 | panC | SAMN04489723_101121 | SAMN04489723_101125 | Acyl-CoA dehydrogenase. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.462 |
SFA73896.1 | panD | SAMN04489723_101121 | SAMN04489723_101124 | Acyl-CoA dehydrogenase. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.500 |
SFA73917.1 | SFA73896.1 | SAMN04489723_101122 | SAMN04489723_101121 | Hypothetical protein. | Acyl-CoA dehydrogenase. | 0.564 |
SFA73917.1 | SFA73944.1 | SAMN04489723_101122 | SAMN04489723_101123 | Hypothetical protein. | Hypothetical protein. | 0.700 |
SFA73917.1 | SFA74024.1 | SAMN04489723_101122 | SAMN04489723_101126 | Hypothetical protein. | Starch synthase. | 0.479 |
SFA73917.1 | SFA74048.1 | SAMN04489723_101122 | SAMN04489723_101127 | Hypothetical protein. | Protein of unknown function. | 0.475 |
SFA73917.1 | panC | SAMN04489723_101122 | SAMN04489723_101125 | Hypothetical protein. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.653 |
SFA73917.1 | panD | SAMN04489723_101122 | SAMN04489723_101124 | Hypothetical protein. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.700 |
SFA73944.1 | SFA73896.1 | SAMN04489723_101123 | SAMN04489723_101121 | Hypothetical protein. | Acyl-CoA dehydrogenase. | 0.502 |
SFA73944.1 | SFA73917.1 | SAMN04489723_101123 | SAMN04489723_101122 | Hypothetical protein. | Hypothetical protein. | 0.700 |
SFA73944.1 | SFA74024.1 | SAMN04489723_101123 | SAMN04489723_101126 | Hypothetical protein. | Starch synthase. | 0.589 |
SFA73944.1 | SFA74048.1 | SAMN04489723_101123 | SAMN04489723_101127 | Hypothetical protein. | Protein of unknown function. | 0.604 |
SFA73944.1 | SFA91641.1 | SAMN04489723_101123 | SAMN04489723_102295 | Hypothetical protein. | Hypothetical protein. | 0.568 |
SFA73944.1 | SFB56105.1 | SAMN04489723_101123 | SAMN04489723_12039 | Hypothetical protein. | Protein of unknown function. | 0.556 |
SFA73944.1 | SFB56147.1 | SAMN04489723_101123 | SAMN04489723_12043 | Hypothetical protein. | Beta-barrel assembly machine subunit BamD. | 0.527 |
SFA73944.1 | SFB56175.1 | SAMN04489723_101123 | SAMN04489723_12045 | Hypothetical protein. | OstA-like protein. | 0.536 |
SFA73944.1 | panC | SAMN04489723_101123 | SAMN04489723_101125 | Hypothetical protein. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.736 |
SFA73944.1 | panD | SAMN04489723_101123 | SAMN04489723_101124 | Hypothetical protein. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.791 |
page 1 of 3