Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA73917.1 | SFA73944.1 | SAMN04489723_101122 | SAMN04489723_101123 | Hypothetical protein. | Hypothetical protein. | 0.700 |
SFA73917.1 | panC | SAMN04489723_101122 | SAMN04489723_101125 | Hypothetical protein. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.653 |
SFA73917.1 | panD | SAMN04489723_101122 | SAMN04489723_101124 | Hypothetical protein. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.700 |
SFA73944.1 | SFA73917.1 | SAMN04489723_101123 | SAMN04489723_101122 | Hypothetical protein. | Hypothetical protein. | 0.700 |
SFA73944.1 | panC | SAMN04489723_101123 | SAMN04489723_101125 | Hypothetical protein. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.736 |
SFA73944.1 | panD | SAMN04489723_101123 | SAMN04489723_101124 | Hypothetical protein. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.791 |
SFA85655.1 | panD | SAMN04489723_10217 | SAMN04489723_101124 | Asparaginase. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.655 |
SFB51086.1 | SFB54905.1 | SAMN04489723_1152 | SAMN04489723_1198 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.823 |
SFB51086.1 | panD | SAMN04489723_1152 | SAMN04489723_101124 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.786 |
SFB54905.1 | SFB51086.1 | SAMN04489723_1198 | SAMN04489723_1152 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.823 |
SFB54905.1 | panD | SAMN04489723_1198 | SAMN04489723_101124 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.786 |
coaX | coaX-2 | SAMN04489723_101199 | SAMN04489723_11546 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.842 |
coaX | panC | SAMN04489723_101199 | SAMN04489723_101125 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.898 |
coaX | panD | SAMN04489723_101199 | SAMN04489723_101124 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.572 |
coaX-2 | coaX | SAMN04489723_11546 | SAMN04489723_101199 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.842 |
coaX-2 | panC | SAMN04489723_11546 | SAMN04489723_101125 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.939 |
coaX-2 | panD | SAMN04489723_11546 | SAMN04489723_101124 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.572 |
panB | panC | SAMN04489723_102152 | SAMN04489723_101125 | Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.997 |
panB | panD | SAMN04489723_102152 | SAMN04489723_101124 | Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.962 |
panC | SFA73917.1 | SAMN04489723_101125 | SAMN04489723_101122 | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | Hypothetical protein. | 0.653 |
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