STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA77100.1Hypothetical protein. (360 aa)    
Predicted Functional Partners:
SFA77076.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
     0.809
SFA77120.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.791
SFB47203.1
Hypothetical protein.
  
     0.705
SFA75829.1
Hypothetical protein.
  
     0.688
SFA77054.1
Voltage-gated potassium channel.
       0.655
SFB53259.1
Hypothetical protein.
  
     0.569
SFB02608.1
Hypothetical protein.
  
     0.554
SFB31287.1
Outer membrane protein assembly factor BamA.
  
     0.551
SFB51564.1
YcxB-like protein.
  
     0.548
SFB33520.1
Hypothetical protein.
  
     0.545
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.