STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA78416.1Thiol:disulfide interchange protein DsbD. (690 aa)    
Predicted Functional Partners:
msrA-3
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.999
SFB35690.1
Thiol-disulfide isomerase or thioredoxin.
 
 
 0.741
SFB45974.1
Thiol-disulfide isomerase or thioredoxin.
 
 
 0.734
SFB40762.1
Peptide-methionine (R)-S-oxide reductase.
    
 
 0.728
SFB17574.1
Thioredoxin.
  
 
 0.695
SFB35498.1
Hypothetical protein.
  
 
 0.695
SFB39927.1
Thiol-disulfide isomerase or thioredoxin.
  
 
 0.695
SFB59914.1
Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family.
  
 
 0.695
SFA78435.1
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase.
       0.653
SFB48821.1
GH3 auxin-responsive promoter.
  
     0.637
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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