Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA81740.1 | SFA81755.1 | SAMN04489723_101466 | SAMN04489723_101467 | DNA-binding transcriptional regulator, AcrR family. | Arylsulfatase A. | 0.584 |
SFA81740.1 | SFA81778.1 | SAMN04489723_101466 | SAMN04489723_101468 | DNA-binding transcriptional regulator, AcrR family. | Protein SCO1/2. | 0.514 |
SFA81740.1 | SFA81801.1 | SAMN04489723_101466 | SAMN04489723_101469 | DNA-binding transcriptional regulator, AcrR family. | MORN repeat variant. | 0.638 |
SFA81740.1 | SFA81823.1 | SAMN04489723_101466 | SAMN04489723_101470 | DNA-binding transcriptional regulator, AcrR family. | YHYH protein. | 0.577 |
SFA81755.1 | SFA81740.1 | SAMN04489723_101467 | SAMN04489723_101466 | Arylsulfatase A. | DNA-binding transcriptional regulator, AcrR family. | 0.584 |
SFA81755.1 | SFA81778.1 | SAMN04489723_101467 | SAMN04489723_101468 | Arylsulfatase A. | Protein SCO1/2. | 0.576 |
SFA81755.1 | SFA81801.1 | SAMN04489723_101467 | SAMN04489723_101469 | Arylsulfatase A. | MORN repeat variant. | 0.675 |
SFA81755.1 | SFA81823.1 | SAMN04489723_101467 | SAMN04489723_101470 | Arylsulfatase A. | YHYH protein. | 0.650 |
SFA81778.1 | SFA81740.1 | SAMN04489723_101468 | SAMN04489723_101466 | Protein SCO1/2. | DNA-binding transcriptional regulator, AcrR family. | 0.514 |
SFA81778.1 | SFA81755.1 | SAMN04489723_101468 | SAMN04489723_101467 | Protein SCO1/2. | Arylsulfatase A. | 0.576 |
SFA81778.1 | SFA81801.1 | SAMN04489723_101468 | SAMN04489723_101469 | Protein SCO1/2. | MORN repeat variant. | 0.881 |
SFA81778.1 | SFA81823.1 | SAMN04489723_101468 | SAMN04489723_101470 | Protein SCO1/2. | YHYH protein. | 0.896 |
SFA81778.1 | SFB17574.1 | SAMN04489723_101468 | SAMN04489723_105103 | Protein SCO1/2. | Thioredoxin. | 0.548 |
SFA81778.1 | SFB59589.1 | SAMN04489723_101468 | SAMN04489723_12635 | Protein SCO1/2. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.879 |
SFA81778.1 | SFB59594.1 | SAMN04489723_101468 | SAMN04489723_12636 | Protein SCO1/2. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.651 |
SFA81778.1 | SFB59620.1 | SAMN04489723_101468 | SAMN04489723_12640 | Protein SCO1/2. | Cytochrome c oxidase subunit 3. | 0.657 |
SFA81778.1 | SFB59640.1 | SAMN04489723_101468 | SAMN04489723_12643 | Protein SCO1/2. | Putative membrane protein. | 0.731 |
SFA81778.1 | ctaB | SAMN04489723_101468 | SAMN04489723_12638 | Protein SCO1/2. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.555 |
SFA81801.1 | SFA81740.1 | SAMN04489723_101469 | SAMN04489723_101466 | MORN repeat variant. | DNA-binding transcriptional regulator, AcrR family. | 0.638 |
SFA81801.1 | SFA81755.1 | SAMN04489723_101469 | SAMN04489723_101467 | MORN repeat variant. | Arylsulfatase A. | 0.675 |
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