Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA72304.1 | SFA72353.1 | SAMN04489723_10153 | SAMN04489723_10155 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | BadF-type ATPase. | 0.493 |
SFA72304.1 | SFA72379.1 | SAMN04489723_10153 | SAMN04489723_10156 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | Predicted heme/steroid binding protein. | 0.493 |
SFA72304.1 | SFA77858.1 | SAMN04489723_10153 | SAMN04489723_101285 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease-3. | 0.577 |
SFA72304.1 | SFB48081.1 | SAMN04489723_10153 | SAMN04489723_112108 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.587 |
SFA72304.1 | SFB52644.1 | SAMN04489723_10153 | SAMN04489723_11660 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | Endonuclease/Exonuclease/phosphatase family protein. | 0.577 |
SFA72304.1 | cmk | SAMN04489723_10153 | SAMN04489723_11252 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | Cytidylate kinase. | 0.659 |
SFA72304.1 | der | SAMN04489723_10153 | SAMN04489723_112105 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.866 |
SFA72304.1 | era | SAMN04489723_10153 | SAMN04489723_112104 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.617 |
SFA72304.1 | ftsY | SAMN04489723_10153 | SAMN04489723_1225 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.496 |
SFA72304.1 | murQ | SAMN04489723_10153 | SAMN04489723_10154 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.493 |
SFA72353.1 | SFA72304.1 | SAMN04489723_10155 | SAMN04489723_10153 | BadF-type ATPase. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.493 |
SFA72353.1 | SFA72379.1 | SAMN04489723_10155 | SAMN04489723_10156 | BadF-type ATPase. | Predicted heme/steroid binding protein. | 0.791 |
SFA72353.1 | murQ | SAMN04489723_10155 | SAMN04489723_10154 | BadF-type ATPase. | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.910 |
SFA72379.1 | SFA72304.1 | SAMN04489723_10156 | SAMN04489723_10153 | Predicted heme/steroid binding protein. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.493 |
SFA72379.1 | SFA72353.1 | SAMN04489723_10156 | SAMN04489723_10155 | Predicted heme/steroid binding protein. | BadF-type ATPase. | 0.791 |
SFA72379.1 | murQ | SAMN04489723_10156 | SAMN04489723_10154 | Predicted heme/steroid binding protein. | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.790 |
SFA77858.1 | SFA72304.1 | SAMN04489723_101285 | SAMN04489723_10153 | Exodeoxyribonuclease-3. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.577 |
SFB48081.1 | SFA72304.1 | SAMN04489723_112108 | SAMN04489723_10153 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.587 |
SFB48081.1 | cmk | SAMN04489723_112108 | SAMN04489723_11252 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Cytidylate kinase. | 0.788 |
SFB48081.1 | der | SAMN04489723_112108 | SAMN04489723_112105 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.658 |
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