STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA87106.1Iron complex outermembrane recepter protein. (994 aa)    
Predicted Functional Partners:
SFA87124.1
Starch-binding associating with outer membrane.
 
     0.935
SFB10174.1
Starch-binding associating with outer membrane.
  
 
   0.711
SFB52290.1
Starch-binding associating with outer membrane.
  
 
   0.679
SFB41435.1
SprB repeat-containing protein.
  
 
   0.661
SFB37746.1
Starch-binding associating with outer membrane.
 
     0.655
SFB48773.1
Starch-binding associating with outer membrane.
  
 
   0.647
SFB27423.1
Starch-binding associating with outer membrane.
  
 
   0.642
SFA98676.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.622
SFB58515.1
SusD family protein.
  
 
   0.616
SFB31783.1
Starch-binding associating with outer membrane.
  
 
   0.615
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.