STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA99517.1Polysaccharide deacetylase. (193 aa)    
Predicted Functional Partners:
SFA99540.1
Polysaccharide deacetylase.
      0.975
SFA99563.1
Hypothetical protein.
       0.686
SFA99587.1
Hypothetical protein.
       0.686
SFA99609.1
Predicted D-glycerate permease.
       0.515
SFA99494.1
SM-20-related protein.
       0.450
SFB59084.1
Hypothetical protein.
    
 
 0.444
SFB17435.1
Haem-binding domain-containing protein.
  
   0.441
SFA91996.1
Peptidyl-prolyl cis-trans isomerase SurA.
   
 
 0.434
SFB47575.1
Hypothetical protein.
  
   0.409
SFB47583.1
Hypothetical protein.
  
   0.409
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.