STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB00486.13',5'-cyclic AMP phosphodiesterase CpdA. (275 aa)    
Predicted Functional Partners:
SFB43933.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
 
 0.877
SFA81055.1
Predicted ATPase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.874
SFB56914.1
TolB amino-terminal domain-containing protein.
 
 
 0.870
SFA98262.1
PAS domain S-box-containing protein.
    
 0.857
SFB41413.1
PAS domain S-box-containing protein.
    
 0.848
SFB58182.1
Adenylate cyclase, class 3.
     
 0.804
SFB45858.1
PAS domain S-box-containing protein.
   
 
 0.756
SFB56763.1
PAS domain S-box-containing protein.
   
 
 0.756
SFB53301.1
Signal transduction histidine kinase.
     
 0.728
SFB56499.1
Ligand-binding sensor domain-containing protein.
  
 
 0.717
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.