Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA72980.1 | SFA80960.1 | SAMN04489723_10182 | SAMN04489723_101430 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Hydroxyacylglutathione hydrolase. | 0.875 |
SFA72980.1 | SFB00604.1 | SAMN04489723_10182 | SAMN04489723_103201 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein. | 0.848 |
SFA72980.1 | SFB20380.1 | SAMN04489723_10182 | SAMN04489723_105246 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.930 |
SFA72980.1 | SFB51756.1 | SAMN04489723_10182 | SAMN04489723_115102 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.875 |
SFA72980.1 | SFB59142.1 | SAMN04489723_10182 | SAMN04489723_12547 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Glyoxylase, beta-lactamase superfamily II. | 0.852 |
SFA80960.1 | SFA72980.1 | SAMN04489723_101430 | SAMN04489723_10182 | Hydroxyacylglutathione hydrolase. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.875 |
SFA80960.1 | SFB00604.1 | SAMN04489723_101430 | SAMN04489723_103201 | Hydroxyacylglutathione hydrolase. | Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein. | 0.889 |
SFA80960.1 | SFB20380.1 | SAMN04489723_101430 | SAMN04489723_105246 | Hydroxyacylglutathione hydrolase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.873 |
SFA80960.1 | SFB42874.1 | SAMN04489723_101430 | SAMN04489723_1103 | Hydroxyacylglutathione hydrolase. | Cytochrome c. | 0.408 |
SFA80960.1 | SFB51756.1 | SAMN04489723_101430 | SAMN04489723_115102 | Hydroxyacylglutathione hydrolase. | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.857 |
SFA80960.1 | SFB58507.1 | SAMN04489723_101430 | SAMN04489723_12412 | Hydroxyacylglutathione hydrolase. | Hypothetical protein. | 0.524 |
SFA80960.1 | SFB59095.1 | SAMN04489723_101430 | SAMN04489723_12542 | Hydroxyacylglutathione hydrolase. | Cytochrome c. | 0.579 |
SFA80960.1 | SFB59142.1 | SAMN04489723_101430 | SAMN04489723_12547 | Hydroxyacylglutathione hydrolase. | Glyoxylase, beta-lactamase superfamily II. | 0.945 |
SFB00588.1 | SFB00604.1 | SAMN04489723_103200 | SAMN04489723_103201 | Hypothetical protein. | Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein. | 0.955 |
SFB00604.1 | SFA72980.1 | SAMN04489723_103201 | SAMN04489723_10182 | Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.848 |
SFB00604.1 | SFA80960.1 | SAMN04489723_103201 | SAMN04489723_101430 | Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein. | Hydroxyacylglutathione hydrolase. | 0.889 |
SFB00604.1 | SFB00588.1 | SAMN04489723_103201 | SAMN04489723_103200 | Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein. | Hypothetical protein. | 0.955 |
SFB00604.1 | SFB20380.1 | SAMN04489723_103201 | SAMN04489723_105246 | Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.806 |
SFB00604.1 | SFB32749.1 | SAMN04489723_103201 | SAMN04489723_107168 | Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein. | Sulfoxide reductase heme-binding subunit YedZ. | 0.866 |
SFB00604.1 | SFB42874.1 | SAMN04489723_103201 | SAMN04489723_1103 | Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein. | Cytochrome c. | 0.722 |
page 1 of 3