STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB01416.1Protein of unknown function. (267 aa)    
Predicted Functional Partners:
SFB40912.1
DNA topoisomerase-1.
  
     0.628
SFB09333.1
Uncharacterized membrane protein.
  
     0.608
SFB01394.1
Cation diffusion facilitator family transporter.
 
     0.542
SFA85461.1
Hypothetical protein.
  
     0.528
SFB01437.1
DNA-binding beta-propeller fold protein YncE.
       0.452
SFB31988.1
Protein of unknown function.
  
     0.443
SFB09430.1
Protein of unknown function.
  
     0.438
SFB50245.1
Undecaprenyl-diphosphatase.
 
     0.412
SFA86092.1
General stress protein 26.
  
     0.411
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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