STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB08555.1DNA-binding response regulator, LytR/AlgR family. (226 aa)    
Predicted Functional Partners:
SFB08580.1
Histidine kinase.
 
   0.955
SFB57630.1
Two component regulator propeller.
  
  0.839
SFA80691.1
Histidine kinase.
  
  0.837
SFB01155.1
Histidine kinase.
  
   0.809
SFB18344.1
Histidine kinase.
  
   0.809
SFB21080.1
Histidine kinase.
  
   0.809
SFB39778.1
Histidine kinase.
  
   0.809
SFA73659.1
Histidine kinase.
  
   0.808
SFB56490.1
7TM diverse intracellular signalling.
  
   0.808
SFB61232.1
Histidine kinase.
  
   0.808
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.