Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA98262.1 | SFB10007.1 | SAMN04489723_10387 | SAMN04489723_104195 | PAS domain S-box-containing protein. | GAF domain-containing protein. | 0.908 |
SFA98262.1 | SFB36466.1 | SAMN04489723_10387 | SAMN04489723_10868 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFA98262.1 | SFB41413.1 | SAMN04489723_10387 | SAMN04489723_109125 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFA98262.1 | SFB43933.1 | SAMN04489723_10387 | SAMN04489723_11089 | PAS domain S-box-containing protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.999 |
SFA98262.1 | SFB45858.1 | SAMN04489723_10387 | SAMN04489723_11159 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFA98262.1 | SFB56914.1 | SAMN04489723_10387 | SAMN04489723_12164 | PAS domain S-box-containing protein. | TolB amino-terminal domain-containing protein. | 0.964 |
SFB01879.1 | SFB09991.1 | SAMN04489723_103263 | SAMN04489723_104194 | HD domain-containing protein. | Calcineurin-like phosphoesterase. | 0.777 |
SFB01879.1 | SFB10007.1 | SAMN04489723_103263 | SAMN04489723_104195 | HD domain-containing protein. | GAF domain-containing protein. | 0.740 |
SFB01879.1 | SFB44355.1 | SAMN04489723_103263 | SAMN04489723_110123 | HD domain-containing protein. | Hypothetical protein. | 0.857 |
SFB09960.1 | SFB09991.1 | SAMN04489723_104192 | SAMN04489723_104194 | HD domain-containing protein. | Calcineurin-like phosphoesterase. | 0.899 |
SFB09960.1 | SFB10007.1 | SAMN04489723_104192 | SAMN04489723_104195 | HD domain-containing protein. | GAF domain-containing protein. | 0.770 |
SFB09991.1 | SFB01879.1 | SAMN04489723_104194 | SAMN04489723_103263 | Calcineurin-like phosphoesterase. | HD domain-containing protein. | 0.777 |
SFB09991.1 | SFB09960.1 | SAMN04489723_104194 | SAMN04489723_104192 | Calcineurin-like phosphoesterase. | HD domain-containing protein. | 0.899 |
SFB09991.1 | SFB10007.1 | SAMN04489723_104194 | SAMN04489723_104195 | Calcineurin-like phosphoesterase. | GAF domain-containing protein. | 0.770 |
SFB09991.1 | SFB44355.1 | SAMN04489723_104194 | SAMN04489723_110123 | Calcineurin-like phosphoesterase. | Hypothetical protein. | 0.781 |
SFB10007.1 | SFA98262.1 | SAMN04489723_104195 | SAMN04489723_10387 | GAF domain-containing protein. | PAS domain S-box-containing protein. | 0.908 |
SFB10007.1 | SFB01879.1 | SAMN04489723_104195 | SAMN04489723_103263 | GAF domain-containing protein. | HD domain-containing protein. | 0.740 |
SFB10007.1 | SFB09960.1 | SAMN04489723_104195 | SAMN04489723_104192 | GAF domain-containing protein. | HD domain-containing protein. | 0.770 |
SFB10007.1 | SFB09991.1 | SAMN04489723_104195 | SAMN04489723_104194 | GAF domain-containing protein. | Calcineurin-like phosphoesterase. | 0.770 |
SFB10007.1 | SFB36466.1 | SAMN04489723_104195 | SAMN04489723_10868 | GAF domain-containing protein. | PAS domain S-box-containing protein. | 0.810 |
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