STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB12666.1Imidazolonepropionase. (565 aa)    
Predicted Functional Partners:
SFB12690.1
Imidazolonepropionase.
    
0.984
SFB12710.1
Imidazolonepropionase.
 
    
0.803
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 0.742
SFA91307.1
Neutral/alkaline non-lysosomal ceramidase, N-terminal.
  
 0.742
SFB00218.1
Glucosamine-6-phosphate deaminase.
  
 0.742
SFB08835.1
Glucosamine-6-phosphate deaminase.
  
 0.742
SFB60383.1
Galactosamine-6-phosphate isomerase.
  
 0.742
SFB12749.1
N-acetylated-alpha-linked acidic dipeptidase.
 
     0.579
SFA77920.1
comF family protein.
  
    0.547
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
    
 0.511
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.