STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB12690.1Imidazolonepropionase. (461 aa)    
Predicted Functional Partners:
SFB12666.1
Imidazolonepropionase.
    
0.984
SFB12710.1
Imidazolonepropionase.
 
    
0.803
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.762
SFB12749.1
N-acetylated-alpha-linked acidic dipeptidase.
 
     0.576
SFB06103.1
Histidine ammonia-lyase.
  
  
 0.541
SFB19498.1
Histidine ammonia-lyase.
  
  
 0.541
SFB12726.1
SH3 domain-containing protein.
       0.501
SFB44145.1
Protein of unknown function.
  
     0.443
SFA76820.1
Zinc carboxypeptidase.
  
     0.438
SFB10267.1
Zn-dependent amino-or carboxypeptidase, M28 family.
  
     0.434
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.