Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB06695.1 | SFB06719.1 | SAMN04489723_10444 | SAMN04489723_10445 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR protein. | 0.618 |
SFB06695.1 | SFB31840.1 | SAMN04489723_10444 | SAMN04489723_107110 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.449 |
SFB06695.1 | SFB46406.1 | SAMN04489723_10444 | SAMN04489723_111116 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.520 |
SFB06719.1 | SFB06695.1 | SAMN04489723_10445 | SAMN04489723_10444 | FecR protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.618 |
SFB06719.1 | SFB06743.1 | SAMN04489723_10445 | SAMN04489723_10446 | FecR protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.664 |
SFB06719.1 | SFB06763.1 | SAMN04489723_10445 | SAMN04489723_10447 | FecR protein. | Starch-binding associating with outer membrane. | 0.564 |
SFB06719.1 | SFB10226.1 | SAMN04489723_10445 | SAMN04489723_104207 | FecR protein. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.517 |
SFB06719.1 | SFB19886.1 | SAMN04489723_10445 | SAMN04489723_105222 | FecR protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.600 |
SFB06719.1 | SFB31840.1 | SAMN04489723_10445 | SAMN04489723_107110 | FecR protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.421 |
SFB06719.1 | SFB37783.1 | SAMN04489723_10445 | SAMN04489723_108158 | FecR protein. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.625 |
SFB06719.1 | SFB37873.1 | SAMN04489723_10445 | SAMN04489723_108164 | FecR protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.691 |
SFB06719.1 | SFB45708.1 | SAMN04489723_10445 | SAMN04489723_11140 | FecR protein. | Hypothetical protein. | 0.436 |
SFB06719.1 | SFB46406.1 | SAMN04489723_10445 | SAMN04489723_111116 | FecR protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.525 |
SFB06743.1 | SFB06719.1 | SAMN04489723_10446 | SAMN04489723_10445 | TonB-linked outer membrane protein, SusC/RagA family. | FecR protein. | 0.664 |
SFB06743.1 | SFB06763.1 | SAMN04489723_10446 | SAMN04489723_10447 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.923 |
SFB06743.1 | SFB10226.1 | SAMN04489723_10446 | SAMN04489723_104207 | TonB-linked outer membrane protein, SusC/RagA family. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.518 |
SFB06743.1 | SFB37783.1 | SAMN04489723_10446 | SAMN04489723_108158 | TonB-linked outer membrane protein, SusC/RagA family. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.470 |
SFB06763.1 | SFB06719.1 | SAMN04489723_10447 | SAMN04489723_10445 | Starch-binding associating with outer membrane. | FecR protein. | 0.564 |
SFB06763.1 | SFB06743.1 | SAMN04489723_10447 | SAMN04489723_10446 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.923 |
SFB06763.1 | SFB10226.1 | SAMN04489723_10447 | SAMN04489723_104207 | Starch-binding associating with outer membrane. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.478 |
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