STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB18217.1Protein of unknown function. (263 aa)    
Predicted Functional Partners:
SFB59156.1
Protein of unknown function.
  
     0.642
SFA77739.1
Ig-like domain-containing protein.
 
    0.590
SFA75731.1
Peptidyl-prolyl cis-trans isomerase D.
 
    0.567
recA
Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.543
SFA92444.1
Beta-barrel assembly machine subunit BamA.
  
     0.536
SFB20937.1
Hypothetical protein.
  
    0.531
SFB18198.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
       0.512
SFB18172.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
       0.507
SFA92016.1
Periplasmic chaperone for outer membrane proteins SurA.
  
    0.483
SFB26949.1
Hypothetical protein.
  
    0.478
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.