STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB18259.1Putative ABC transport system permease protein. (415 aa)    
Predicted Functional Partners:
SFB53158.1
Putative ABC transport system ATP-binding protein.
   0.985
SFB01334.1
Putative ABC transport system ATP-binding protein.
 
   0.972
SFA97458.1
ABC-type lipoprotein export system, ATPase component.
   0.969
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
   0.932
SFB55013.1
Putative ABC transport system ATP-binding protein.
 
   0.930
SFB16390.1
Putative ABC transport system ATP-binding protein.
 
   0.927
SFB58614.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.831
SFB24694.1
Cell division transport system ATP-binding protein.
 
      0.686
SFB16174.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
      0.648
SFB58606.1
Outer membrane protein.
 
   0.583
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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