Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA72637.1 | SFA98262.1 | SAMN04489723_10167 | SAMN04489723_10387 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | PAS domain S-box-containing protein. | 0.420 |
SFA72637.1 | SFB18600.1 | SAMN04489723_10167 | SAMN04489723_105157 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | 0.609 |
SFA72637.1 | SFB58623.1 | SAMN04489723_10167 | SAMN04489723_12425 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.593 |
SFA77920.1 | SFA98262.1 | SAMN04489723_101288 | SAMN04489723_10387 | comF family protein. | PAS domain S-box-containing protein. | 0.836 |
SFA77920.1 | SFB18600.1 | SAMN04489723_101288 | SAMN04489723_105157 | comF family protein. | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | 0.611 |
SFA98262.1 | SFA72637.1 | SAMN04489723_10387 | SAMN04489723_10167 | PAS domain S-box-containing protein. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.420 |
SFA98262.1 | SFA77920.1 | SAMN04489723_10387 | SAMN04489723_101288 | PAS domain S-box-containing protein. | comF family protein. | 0.836 |
SFA98262.1 | SFB18600.1 | SAMN04489723_10387 | SAMN04489723_105157 | PAS domain S-box-containing protein. | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | 0.527 |
SFA98262.1 | SFB50730.1 | SAMN04489723_10387 | SAMN04489723_114100 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.790 |
SFA98262.1 | mutL | SAMN04489723_10387 | SAMN04489723_11551 | PAS domain S-box-containing protein. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.437 |
SFB18600.1 | SFA72637.1 | SAMN04489723_105157 | SAMN04489723_10167 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.609 |
SFB18600.1 | SFA77920.1 | SAMN04489723_105157 | SAMN04489723_101288 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | comF family protein. | 0.611 |
SFB18600.1 | SFA98262.1 | SAMN04489723_105157 | SAMN04489723_10387 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | PAS domain S-box-containing protein. | 0.527 |
SFB18600.1 | SFB18614.1 | SAMN04489723_105157 | SAMN04489723_105158 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | Hypothetical protein. | 0.521 |
SFB18600.1 | SFB50730.1 | SAMN04489723_105157 | SAMN04489723_114100 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | Hypothetical protein. | 0.483 |
SFB18600.1 | SFB58623.1 | SAMN04489723_105157 | SAMN04489723_12425 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.704 |
SFB18600.1 | mutL | SAMN04489723_105157 | SAMN04489723_11551 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.471 |
SFB18600.1 | mutS | SAMN04489723_105157 | SAMN04489723_101295 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.461 |
SFB18600.1 | pheT | SAMN04489723_105157 | SAMN04489723_105159 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.501 |
SFB18600.1 | rpsT | SAMN04489723_105157 | SAMN04489723_105156 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.566 |
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