Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA71298.1 | menD | SAMN04489723_10110 | SAMN04489723_105207 | Pimeloyl-ACP methyl ester carboxylesterase. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.408 |
SFB19623.1 | SFB19639.1 | SAMN04489723_105208 | SAMN04489723_105209 | Isochorismate synthase. | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase. | 0.860 |
SFB19623.1 | SFB19657.1 | SAMN04489723_105208 | SAMN04489723_105210 | Isochorismate synthase. | Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 0.633 |
SFB19623.1 | SFB46144.1 | SAMN04489723_105208 | SAMN04489723_11189 | Isochorismate synthase. | O-succinylbenzoic acid--CoA ligase. | 0.797 |
SFB19623.1 | SFB52208.1 | SAMN04489723_105208 | SAMN04489723_11612 | Isochorismate synthase. | O-succinylbenzoate synthase. | 0.783 |
SFB19623.1 | menA | SAMN04489723_105208 | SAMN04489723_104189 | Isochorismate synthase. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.769 |
SFB19623.1 | menB | SAMN04489723_105208 | SAMN04489723_11188 | Isochorismate synthase. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.784 |
SFB19623.1 | menD | SAMN04489723_105208 | SAMN04489723_105207 | Isochorismate synthase. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.992 |
SFB19639.1 | SFB19623.1 | SAMN04489723_105209 | SAMN04489723_105208 | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase. | Isochorismate synthase. | 0.860 |
SFB19639.1 | SFB19657.1 | SAMN04489723_105209 | SAMN04489723_105210 | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase. | Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 0.594 |
SFB19639.1 | SFB46144.1 | SAMN04489723_105209 | SAMN04489723_11189 | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase. | O-succinylbenzoic acid--CoA ligase. | 0.523 |
SFB19639.1 | menA | SAMN04489723_105209 | SAMN04489723_104189 | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.868 |
SFB19639.1 | menB | SAMN04489723_105209 | SAMN04489723_11188 | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.907 |
SFB19639.1 | menD | SAMN04489723_105209 | SAMN04489723_105207 | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.903 |
SFB19657.1 | SFB19623.1 | SAMN04489723_105210 | SAMN04489723_105208 | Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | Isochorismate synthase. | 0.633 |
SFB19657.1 | SFB19639.1 | SAMN04489723_105210 | SAMN04489723_105209 | Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase. | 0.594 |
SFB19657.1 | menD | SAMN04489723_105210 | SAMN04489723_105207 | Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.592 |
SFB46144.1 | SFB19623.1 | SAMN04489723_11189 | SAMN04489723_105208 | O-succinylbenzoic acid--CoA ligase. | Isochorismate synthase. | 0.797 |
SFB46144.1 | SFB19639.1 | SAMN04489723_11189 | SAMN04489723_105209 | O-succinylbenzoic acid--CoA ligase. | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase. | 0.523 |
SFB46144.1 | SFB52208.1 | SAMN04489723_11189 | SAMN04489723_11612 | O-succinylbenzoic acid--CoA ligase. | O-succinylbenzoate synthase. | 0.948 |
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