STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB20767.1Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. (296 aa)    
Predicted Functional Partners:
SFB57959.1
Phytoene/squalene synthetase.
  
 0.801
SFA96747.1
Protein of unknown function.
  
 
   0.776
SFA96639.1
4Fe-4S binding domain-containing protein.
  
     0.735
SFB20787.1
Hypothetical protein.
       0.727
SFA96839.1
Hypothetical protein.
  
    0.719
SFA96595.1
Pyridine nucleotide-disulphide oxidoreductase.
  
     0.714
SFA96795.1
Hypothetical protein.
  
     0.689
SFA96569.1
Protein of unknown function, DUF547.
 
     0.681
SFA96686.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
   0.679
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 0.651
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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