STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB21166.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
SFB61026.1
dITPase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
  
 0.779
SFB56136.1
DNA-directed RNA polymerase, subunit K/omega.
  
     0.661
SFA96503.1
Type I restriction enzyme R protein N terminus (HSDR_N).
  
     0.622
SFB21133.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase.
       0.555
SFB21151.1
Rhodanese-related sulfurtransferase.
       0.555
SFB02223.1
Bifunctional non-homologous end joining protein LigD.
  
 
 
 0.490
SFA71852.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
   
   0.461
SFB11984.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
   
   0.461
SFB44643.1
tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
 
 0.447
SFB21112.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
    0.412
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.