Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA76221.1 | SFB21219.1 | SAMN04489723_101214 | SAMN04489723_105289 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Hypothetical protein. | 0.702 |
SFA76221.1 | SFB56505.1 | SAMN04489723_101214 | SAMN04489723_1217 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.998 |
SFA76221.1 | SFB57520.1 | SAMN04489723_101214 | SAMN04489723_12242 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.997 |
SFA76221.1 | SFB60532.1 | SAMN04489723_101214 | SAMN04489723_12933 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.988 |
SFB11692.1 | SFB21219.1 | SAMN04489723_104287 | SAMN04489723_105289 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Hypothetical protein. | 0.579 |
SFB21204.1 | SFB21219.1 | SAMN04489723_105288 | SAMN04489723_105289 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Hypothetical protein. | 0.532 |
SFB21204.1 | hisS | SAMN04489723_105288 | SAMN04489723_105287 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | histidyl-tRNA synthetase. | 0.673 |
SFB21219.1 | SFA76221.1 | SAMN04489723_105289 | SAMN04489723_101214 | Hypothetical protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.702 |
SFB21219.1 | SFB11692.1 | SAMN04489723_105289 | SAMN04489723_104287 | Hypothetical protein. | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.579 |
SFB21219.1 | SFB21204.1 | SAMN04489723_105289 | SAMN04489723_105288 | Hypothetical protein. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.532 |
SFB21219.1 | SFB45726.1 | SAMN04489723_105289 | SAMN04489723_11142 | Hypothetical protein. | DNA polymerase III, delta subunit. | 0.454 |
SFB21219.1 | SFB56136.1 | SAMN04489723_105289 | SAMN04489723_12042 | Hypothetical protein. | DNA-directed RNA polymerase, subunit K/omega. | 0.448 |
SFB21219.1 | SFB56505.1 | SAMN04489723_105289 | SAMN04489723_1217 | Hypothetical protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.599 |
SFB21219.1 | SFB56681.1 | SAMN04489723_105289 | SAMN04489723_12132 | Hypothetical protein. | Dolichol-phosphate mannosyltransferase. | 0.483 |
SFB21219.1 | SFB57520.1 | SAMN04489723_105289 | SAMN04489723_12242 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.545 |
SFB21219.1 | SFB60532.1 | SAMN04489723_105289 | SAMN04489723_12933 | Hypothetical protein. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.520 |
SFB21219.1 | hisS | SAMN04489723_105289 | SAMN04489723_105287 | Hypothetical protein. | histidyl-tRNA synthetase. | 0.554 |
SFB45726.1 | SFB21219.1 | SAMN04489723_11142 | SAMN04489723_105289 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.454 |
SFB45726.1 | SFB56136.1 | SAMN04489723_11142 | SAMN04489723_12042 | DNA polymerase III, delta subunit. | DNA-directed RNA polymerase, subunit K/omega. | 0.445 |
SFB56136.1 | SFB21219.1 | SAMN04489723_12042 | SAMN04489723_105289 | DNA-directed RNA polymerase, subunit K/omega. | Hypothetical protein. | 0.448 |
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