STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB17435.1Haem-binding domain-containing protein. (169 aa)    
Predicted Functional Partners:
SFB58886.1
WD40-like Beta Propeller Repeat.
  
 
 0.686
SFA90976.1
WD40-like Beta Propeller Repeat.
  
   0.658
SFB52915.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
   
  
 0.563
SFB07908.1
Hypothetical protein.
  
   0.559
SFB07931.1
Hypothetical protein.
  
   0.550
SFB07886.1
Hypothetical protein.
  
   0.547
SFA71424.1
Hypothetical protein.
   
   0.473
SFA71497.1
Hypothetical protein.
   
   0.473
SFA87357.1
Hypothetical protein.
   
   0.473
SFA87871.1
Protein of unknown function.
   
   0.473
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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