STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB26525.1Chitinase; Belongs to the glycosyl hydrolase 18 family. (403 aa)    
Predicted Functional Partners:
SFB59589.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.817
SFB11984.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
 
      0.757
SFB11108.1
Hexosaminidase.
 
  
 0.756
SFB51351.1
Beta-glucosidase.
   
 
 0.756
SFA99635.1
Glycosyl hydrolase family 20, catalytic domain.
 
  
 0.754
SFB59613.1
Cytochrome c oxidase subunit 3.
    
 0.717
SFB59620.1
Cytochrome c oxidase subunit 3.
    
 0.717
SFB00303.1
Beta-glucosidase.
  
 
 0.685
SFB25434.1
Hexosaminidase.
 
  
 0.670
SFB24427.1
Mannobiose 2-epimerase.
  
  
  0.580
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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