STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB27169.1Uncharacterized iron-regulated protein. (287 aa)    
Predicted Functional Partners:
SFB27127.1
Cell division initiation protein.
     
 0.793
SFB27149.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.787
SFB27101.1
WD domain-containing protein, G-beta repeat-containing protein.
       0.784
SFB27189.1
Protein of unknown function.
       0.594
SFB27063.1
AhpC/TSA family protein.
       0.564
SFB27084.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
       0.564
SFB49024.1
Nitrite reductase (NADH) small subunit.
    
  0.441
SFB60783.1
Nitrite reductase (NADH) small subunit.
    
  0.435
SFA78939.1
Ligand-binding SRPBCC domain-containing protein.
  
     0.416
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.