STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB27533.1Hypothetical protein. (348 aa)    
Predicted Functional Partners:
SFB53592.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.766
SFB25402.1
Right handed beta helix region.
  
     0.709
SFA99679.1
Hypothetical protein.
  
     0.700
SFB52252.1
Hypothetical protein.
  
     0.691
SFB12323.1
Lysophospholipase L1.
  
     0.690
SFB52260.1
Hypothetical protein.
  
     0.661
SFB52272.1
Hypothetical protein.
  
     0.659
SFB32653.1
Right handed beta helix region.
  
     0.650
SFA99635.1
Glycosyl hydrolase family 20, catalytic domain.
  
    0.632
SFB27547.1
Glycosyl hydrolases family 43.
 
    
0.624
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.