STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB27571.1Hypothetical protein. (360 aa)    
Predicted Functional Partners:
SFB02321.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.715
SFB25402.1
Right handed beta helix region.
  
     0.714
SFB27547.1
Glycosyl hydrolases family 43.
 
    
0.606
SFB60915.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.585
SFB49840.1
alpha-L-fucosidase.
  
     0.584
SFB53552.1
alpha-L-fucosidase.
  
     0.543
SFB27589.1
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.531
SFB12323.1
Lysophospholipase L1.
  
     0.515
SFB27533.1
Hypothetical protein.
 
    
0.504
SFB32653.1
Right handed beta helix region.
  
     0.488
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.