Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA85750.1 | SFB19138.1 | SAMN04489723_10222 | SAMN04489723_105184 | Hypothetical protein. | Hypothetical protein. | 0.420 |
SFA85750.1 | SFB24707.1 | SAMN04489723_10222 | SAMN04489723_10665 | Hypothetical protein. | Hypothetical protein. | 0.761 |
SFA85750.1 | SFB44017.1 | SAMN04489723_10222 | SAMN04489723_11095 | Hypothetical protein. | Hypothetical protein. | 0.506 |
SFA85750.1 | SFB45401.1 | SAMN04489723_10222 | SAMN04489723_1117 | Hypothetical protein. | Hypothetical protein. | 0.677 |
SFA85750.1 | ispH | SAMN04489723_10222 | SAMN04489723_11251 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.609 |
SFA85750.1 | ispH-2 | SAMN04489723_10222 | SAMN04489723_12312 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.575 |
SFB19138.1 | SFA85750.1 | SAMN04489723_105184 | SAMN04489723_10222 | Hypothetical protein. | Hypothetical protein. | 0.420 |
SFB19138.1 | SFB24707.1 | SAMN04489723_105184 | SAMN04489723_10665 | Hypothetical protein. | Hypothetical protein. | 0.613 |
SFB19138.1 | SFB45401.1 | SAMN04489723_105184 | SAMN04489723_1117 | Hypothetical protein. | Hypothetical protein. | 0.721 |
SFB24680.1 | SFB24694.1 | SAMN04489723_10663 | SAMN04489723_10664 | C-terminal processing protease CtpA/Prc, contains a PDZ domain. | Cell division transport system ATP-binding protein. | 0.590 |
SFB24680.1 | SFB24707.1 | SAMN04489723_10663 | SAMN04489723_10665 | C-terminal processing protease CtpA/Prc, contains a PDZ domain. | Hypothetical protein. | 0.584 |
SFB24680.1 | tal | SAMN04489723_10663 | SAMN04489723_10666 | C-terminal processing protease CtpA/Prc, contains a PDZ domain. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.485 |
SFB24694.1 | SFB24680.1 | SAMN04489723_10664 | SAMN04489723_10663 | Cell division transport system ATP-binding protein. | C-terminal processing protease CtpA/Prc, contains a PDZ domain. | 0.590 |
SFB24694.1 | SFB24707.1 | SAMN04489723_10664 | SAMN04489723_10665 | Cell division transport system ATP-binding protein. | Hypothetical protein. | 0.791 |
SFB24694.1 | tal | SAMN04489723_10664 | SAMN04489723_10666 | Cell division transport system ATP-binding protein. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.662 |
SFB24707.1 | SFA85750.1 | SAMN04489723_10665 | SAMN04489723_10222 | Hypothetical protein. | Hypothetical protein. | 0.761 |
SFB24707.1 | SFB19138.1 | SAMN04489723_10665 | SAMN04489723_105184 | Hypothetical protein. | Hypothetical protein. | 0.613 |
SFB24707.1 | SFB24680.1 | SAMN04489723_10665 | SAMN04489723_10663 | Hypothetical protein. | C-terminal processing protease CtpA/Prc, contains a PDZ domain. | 0.584 |
SFB24707.1 | SFB24694.1 | SAMN04489723_10665 | SAMN04489723_10664 | Hypothetical protein. | Cell division transport system ATP-binding protein. | 0.791 |
SFB24707.1 | SFB43963.1 | SAMN04489723_10665 | SAMN04489723_11091 | Hypothetical protein. | Hypothetical protein. | 0.613 |
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