STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB32077.1WD40-like Beta Propeller Repeat. (488 aa)    
Predicted Functional Partners:
SFB32123.1
Hypothetical protein.
 
     0.842
SFB32092.1
Repeat domain-containing protein.
 
     0.790
SFB32063.1
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. Belongs to the DapA family.
       0.773
SFB32107.1
Uncharacterized sulfatase.
       0.751
SFB32137.1
Uncharacterized sulfatase.
       0.740
SFB32150.1
Starch-binding associating with outer membrane.
       0.740
SFB32165.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.730
SFB32051.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.715
SFB32039.1
L-ribulokinase; Belongs to the FGGY kinase family.
 
     0.642
SFB10647.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.586
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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