Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA79912.1 | SFA97136.1 | SAMN04489723_101380 | SAMN04489723_10335 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Serine aminopeptidase, S33. | 0.863 |
SFA79912.1 | SFB20499.1 | SAMN04489723_101380 | SAMN04489723_105252 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 4Fe-4S dicluster domain-containing protein. | 0.945 |
SFA79912.1 | SFB32768.1 | SAMN04489723_101380 | SAMN04489723_107169 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | NAD(P)H dehydrogenase (quinone). | 0.747 |
SFA79912.1 | SFB32790.1 | SAMN04489723_101380 | SAMN04489723_107170 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Oxidoreductase FAD-binding domain-containing protein. | 0.650 |
SFA79912.1 | SFB38235.1 | SAMN04489723_101380 | SAMN04489723_108187 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Deoxyadenosine/deoxycytidine kinase. | 0.926 |
SFA79912.1 | SFB44537.1 | SAMN04489723_101380 | SAMN04489723_110141 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Cytochrome b6-f complex iron-sulfur subunit. | 0.872 |
SFA79912.1 | SFB53253.1 | SAMN04489723_101380 | SAMN04489723_11720 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Thioredoxin-like [2Fe-2S] ferredoxin. | 0.921 |
SFA97136.1 | SFA79912.1 | SAMN04489723_10335 | SAMN04489723_101380 | Serine aminopeptidase, S33. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.863 |
SFA97136.1 | SFB20499.1 | SAMN04489723_10335 | SAMN04489723_105252 | Serine aminopeptidase, S33. | 4Fe-4S dicluster domain-containing protein. | 0.970 |
SFA97136.1 | SFB32768.1 | SAMN04489723_10335 | SAMN04489723_107169 | Serine aminopeptidase, S33. | NAD(P)H dehydrogenase (quinone). | 0.734 |
SFA97136.1 | SFB53253.1 | SAMN04489723_10335 | SAMN04489723_11720 | Serine aminopeptidase, S33. | Thioredoxin-like [2Fe-2S] ferredoxin. | 0.944 |
SFB20499.1 | SFA79912.1 | SAMN04489723_105252 | SAMN04489723_101380 | 4Fe-4S dicluster domain-containing protein. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.945 |
SFB20499.1 | SFA97136.1 | SAMN04489723_105252 | SAMN04489723_10335 | 4Fe-4S dicluster domain-containing protein. | Serine aminopeptidase, S33. | 0.970 |
SFB20499.1 | SFB32768.1 | SAMN04489723_105252 | SAMN04489723_107169 | 4Fe-4S dicluster domain-containing protein. | NAD(P)H dehydrogenase (quinone). | 0.948 |
SFB20499.1 | SFB38235.1 | SAMN04489723_105252 | SAMN04489723_108187 | 4Fe-4S dicluster domain-containing protein. | Deoxyadenosine/deoxycytidine kinase. | 0.988 |
SFB20499.1 | SFB44537.1 | SAMN04489723_105252 | SAMN04489723_110141 | 4Fe-4S dicluster domain-containing protein. | Cytochrome b6-f complex iron-sulfur subunit. | 0.998 |
SFB20499.1 | SFB53253.1 | SAMN04489723_105252 | SAMN04489723_11720 | 4Fe-4S dicluster domain-containing protein. | Thioredoxin-like [2Fe-2S] ferredoxin. | 0.999 |
SFB32704.1 | SFB32726.1 | SAMN04489723_107166 | SAMN04489723_107167 | AraC-type DNA-binding protein. | Hypothetical protein. | 0.542 |
SFB32704.1 | SFB32749.1 | SAMN04489723_107166 | SAMN04489723_107168 | AraC-type DNA-binding protein. | Sulfoxide reductase heme-binding subunit YedZ. | 0.698 |
SFB32704.1 | SFB32768.1 | SAMN04489723_107166 | SAMN04489723_107169 | AraC-type DNA-binding protein. | NAD(P)H dehydrogenase (quinone). | 0.766 |
page 1 of 3