Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA80477.1 | SFB25824.1 | SAMN04489723_101407 | SAMN04489723_106146 | Glutamate synthase (NADH) small subunit. | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.569 |
SFA80477.1 | SFB33040.1 | SAMN04489723_101407 | SAMN04489723_107184 | Glutamate synthase (NADH) small subunit. | S-formylglutathione hydrolase FrmB. | 0.411 |
SFA80477.1 | SFB51756.1 | SAMN04489723_101407 | SAMN04489723_115102 | Glutamate synthase (NADH) small subunit. | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.855 |
SFA80477.1 | SFB53253.1 | SAMN04489723_101407 | SAMN04489723_11720 | Glutamate synthase (NADH) small subunit. | Thioredoxin-like [2Fe-2S] ferredoxin. | 0.608 |
SFB25824.1 | SFA80477.1 | SAMN04489723_106146 | SAMN04489723_101407 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Glutamate synthase (NADH) small subunit. | 0.569 |
SFB25824.1 | SFB33040.1 | SAMN04489723_106146 | SAMN04489723_107184 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | S-formylglutathione hydrolase FrmB. | 0.410 |
SFB25824.1 | SFB51756.1 | SAMN04489723_106146 | SAMN04489723_115102 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.910 |
SFB25824.1 | SFB53253.1 | SAMN04489723_106146 | SAMN04489723_11720 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Thioredoxin-like [2Fe-2S] ferredoxin. | 0.599 |
SFB28234.1 | SFB33040.1 | SAMN04489723_106262 | SAMN04489723_107184 | S-formylglutathione hydrolase FrmB. | S-formylglutathione hydrolase FrmB. | 0.406 |
SFB33040.1 | SFA80477.1 | SAMN04489723_107184 | SAMN04489723_101407 | S-formylglutathione hydrolase FrmB. | Glutamate synthase (NADH) small subunit. | 0.411 |
SFB33040.1 | SFB25824.1 | SAMN04489723_107184 | SAMN04489723_106146 | S-formylglutathione hydrolase FrmB. | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.410 |
SFB33040.1 | SFB28234.1 | SAMN04489723_107184 | SAMN04489723_106262 | S-formylglutathione hydrolase FrmB. | S-formylglutathione hydrolase FrmB. | 0.406 |
SFB33040.1 | SFB33058.1 | SAMN04489723_107184 | SAMN04489723_107185 | S-formylglutathione hydrolase FrmB. | Acyltransferase. | 0.599 |
SFB33040.1 | SFB51756.1 | SAMN04489723_107184 | SAMN04489723_115102 | S-formylglutathione hydrolase FrmB. | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.476 |
SFB33040.1 | SFB53253.1 | SAMN04489723_107184 | SAMN04489723_11720 | S-formylglutathione hydrolase FrmB. | Thioredoxin-like [2Fe-2S] ferredoxin. | 0.427 |
SFB33058.1 | SFB33040.1 | SAMN04489723_107185 | SAMN04489723_107184 | Acyltransferase. | S-formylglutathione hydrolase FrmB. | 0.599 |
SFB51756.1 | SFA80477.1 | SAMN04489723_115102 | SAMN04489723_101407 | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Glutamate synthase (NADH) small subunit. | 0.855 |
SFB51756.1 | SFB25824.1 | SAMN04489723_115102 | SAMN04489723_106146 | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.910 |
SFB51756.1 | SFB33040.1 | SAMN04489723_115102 | SAMN04489723_107184 | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | S-formylglutathione hydrolase FrmB. | 0.476 |
SFB51756.1 | SFB53253.1 | SAMN04489723_115102 | SAMN04489723_11720 | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Thioredoxin-like [2Fe-2S] ferredoxin. | 0.996 |
page 1 of 2