Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB26140.1 | SFB33237.1 | SAMN04489723_106162 | SAMN04489723_107195 | Sugar (pentulose or hexulose) kinase. | L-rhamnose mutarotase. | 0.599 |
SFB33138.1 | SFB33151.1 | SAMN04489723_107189 | SAMN04489723_107190 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.808 |
SFB33138.1 | SFB33171.1 | SAMN04489723_107189 | SAMN04489723_107191 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | L-fuconolactonase. | 0.786 |
SFB33138.1 | SFB33202.1 | SAMN04489723_107189 | SAMN04489723_107193 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | L-fucose dehydrogenase. | 0.519 |
SFB33138.1 | SFB33220.1 | SAMN04489723_107189 | SAMN04489723_107194 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | MFS transporter, FHS family, L-fucose permease. | 0.489 |
SFB33138.1 | SFB33237.1 | SAMN04489723_107189 | SAMN04489723_107195 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | L-rhamnose mutarotase. | 0.708 |
SFB33151.1 | SFB33138.1 | SAMN04489723_107190 | SAMN04489723_107189 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.808 |
SFB33151.1 | SFB33171.1 | SAMN04489723_107190 | SAMN04489723_107191 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | L-fuconolactonase. | 0.851 |
SFB33151.1 | SFB33190.1 | SAMN04489723_107190 | SAMN04489723_107192 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family. | 0.596 |
SFB33151.1 | SFB33202.1 | SAMN04489723_107190 | SAMN04489723_107193 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | L-fucose dehydrogenase. | 0.728 |
SFB33151.1 | SFB33220.1 | SAMN04489723_107190 | SAMN04489723_107194 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | MFS transporter, FHS family, L-fucose permease. | 0.644 |
SFB33151.1 | SFB33237.1 | SAMN04489723_107190 | SAMN04489723_107195 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | L-rhamnose mutarotase. | 0.628 |
SFB33151.1 | SFB33252.1 | SAMN04489723_107190 | SAMN04489723_107196 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Acetyl esterase/lipase. | 0.457 |
SFB33151.1 | SFB53505.1 | SAMN04489723_107190 | SAMN04489723_11761 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.654 |
SFB33171.1 | SFB33138.1 | SAMN04489723_107191 | SAMN04489723_107189 | L-fuconolactonase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.786 |
SFB33171.1 | SFB33151.1 | SAMN04489723_107191 | SAMN04489723_107190 | L-fuconolactonase. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.851 |
SFB33171.1 | SFB33190.1 | SAMN04489723_107191 | SAMN04489723_107192 | L-fuconolactonase. | Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family. | 0.596 |
SFB33171.1 | SFB33202.1 | SAMN04489723_107191 | SAMN04489723_107193 | L-fuconolactonase. | L-fucose dehydrogenase. | 0.948 |
SFB33171.1 | SFB33220.1 | SAMN04489723_107191 | SAMN04489723_107194 | L-fuconolactonase. | MFS transporter, FHS family, L-fucose permease. | 0.788 |
SFB33171.1 | SFB33237.1 | SAMN04489723_107191 | SAMN04489723_107195 | L-fuconolactonase. | L-rhamnose mutarotase. | 0.878 |
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