STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB31287.1Outer membrane protein assembly factor BamA. (791 aa)    
Predicted Functional Partners:
SFB45718.1
Tetratricopeptide repeat-containing protein.
 
 
 0.851
SFB56147.1
Beta-barrel assembly machine subunit BamD.
  
 
 0.829
SFB08339.1
Protein of unknown function.
  
 
   0.800
SFB31322.1
Undecaprenyl-diphosphatase.
 
     0.797
SFB56175.1
OstA-like protein.
  
  
 0.776
SFA99844.1
Family of unknown function.
 
     0.775
SFB56854.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
    0.766
SFA87545.1
Protein of unknown function.
  
     0.764
SFB19749.1
Putative porin.
  
     0.764
SFA90634.1
Cell division protein FtsQ.
  
   
 0.761
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.