STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB37531.1Voltage-gated potassium channel. (208 aa)    
Predicted Functional Partners:
SFA77009.1
Potassium uptake protein, TrkH family.
  
 
 0.652
SFB45535.1
Trk system potassium uptake protein TrkH.
  
 
 0.652
SFB50140.1
Trk-type K+ transport system, membrane component.
  
 
 0.652
SFB56738.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
 0.638
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.545
SFA79212.1
Molybdopterin synthase catalytic subunit.
   
    0.511
SFA91832.1
uroporphyrinogen-III synthase.
  
    0.445
SFB37544.1
Glycine/D-amino acid oxidase.
       0.404
SFB37558.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.404
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.