Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA87124.1 | SFB37762.1 | SAMN04489723_10298 | SAMN04489723_108156 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.701 |
SFA87124.1 | SFB48773.1 | SAMN04489723_10298 | SAMN04489723_11317 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.476 |
SFB21292.1 | SFB37762.1 | SAMN04489723_105293 | SAMN04489723_108156 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.574 |
SFB21292.1 | SFB49073.1 | SAMN04489723_105293 | SAMN04489723_11371 | Starch-binding associating with outer membrane. | TonB-dependent Receptor Plug Domain. | 0.524 |
SFB27423.1 | SFB37762.1 | SAMN04489723_106222 | SAMN04489723_108156 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.543 |
SFB27423.1 | SFB46374.1 | SAMN04489723_106222 | SAMN04489723_111113 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.648 |
SFB27423.1 | SFB48773.1 | SAMN04489723_106222 | SAMN04489723_11317 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.406 |
SFB27423.1 | SFB49073.1 | SAMN04489723_106222 | SAMN04489723_11371 | Starch-binding associating with outer membrane. | TonB-dependent Receptor Plug Domain. | 0.519 |
SFB27423.1 | SFB52290.1 | SAMN04489723_106222 | SAMN04489723_11623 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.637 |
SFB35639.1 | SFB37746.1 | SAMN04489723_10811 | SAMN04489723_108155 | Outer membrane protein TolC. | Starch-binding associating with outer membrane. | 0.436 |
SFB35639.1 | SFB37762.1 | SAMN04489723_10811 | SAMN04489723_108156 | Outer membrane protein TolC. | TonB-linked outer membrane protein, SusC/RagA family. | 0.531 |
SFB37746.1 | SFB35639.1 | SAMN04489723_108155 | SAMN04489723_10811 | Starch-binding associating with outer membrane. | Outer membrane protein TolC. | 0.436 |
SFB37746.1 | SFB37762.1 | SAMN04489723_108155 | SAMN04489723_108156 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.944 |
SFB37746.1 | SFB37773.1 | SAMN04489723_108155 | SAMN04489723_108157 | Starch-binding associating with outer membrane. | FecR protein. | 0.460 |
SFB37746.1 | SFB46374.1 | SAMN04489723_108155 | SAMN04489723_111113 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.709 |
SFB37746.1 | SFB48773.1 | SAMN04489723_108155 | SAMN04489723_11317 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.698 |
SFB37746.1 | SFB49073.1 | SAMN04489723_108155 | SAMN04489723_11371 | Starch-binding associating with outer membrane. | TonB-dependent Receptor Plug Domain. | 0.537 |
SFB37746.1 | SFB52290.1 | SAMN04489723_108155 | SAMN04489723_11623 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.440 |
SFB37762.1 | SFA87124.1 | SAMN04489723_108156 | SAMN04489723_10298 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.701 |
SFB37762.1 | SFB21292.1 | SAMN04489723_108156 | SAMN04489723_105293 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.574 |
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