STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB38010.1Lysophospholipase L1. (500 aa)    
Predicted Functional Partners:
SFB37978.1
Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  0.934
SFB32394.1
Protein of unknown function.
  
   0.750
SFB32375.1
Pectate lyase.
  
  
  0.702
SFB37996.1
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
     0.695
SFB32360.1
Protein of unknown function.
  
   0.686
SFB55235.1
Endo-1,4-beta-xylanase.
  
  
  0.655
SFA93142.1
Por secretion system C-terminal sorting domain-containing protein.
  
  0.599
SFB53610.1
Hypothetical protein.
  
 
  0.550
SFB40955.1
Beta galactosidase small chain.
  
    0.537
SFA81322.1
Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.536
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (20%) [HD]