STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB36825.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
SFB36836.1
Por secretion system C-terminal sorting domain-containing protein.
       0.791
SFB54461.1
Peptidase family C25.
  
     0.718
SFB36813.1
Phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
 
     0.712
SFB48870.1
Hypothetical protein.
  
     0.707
SFA92952.1
Hypothetical protein.
  
     0.670
SFB56271.1
Hypothetical protein.
  
     0.666
SFA98452.1
Hypothetical protein.
  
     0.662
SFB36848.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.633
SFB56237.1
Hypothetical protein.
  
     0.621
SFB33749.1
Hypothetical protein.
  
     0.608
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.