STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB41124.1Glucose/arabinose dehydrogenase, beta-propeller fold. (701 aa)    
Predicted Functional Partners:
SFB41136.1
Protein of unknown function.
     0.938
SFB51756.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
  
  0.851
SFB60451.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein.
  
 
 0.848
SFB42874.1
Cytochrome c.
 
  
  0.839
SFB37735.1
Protein of unknown function.
 
     0.763
SFB09447.1
Multicopper oxidase.
  
 
 0.757
SFB37207.1
Protein of unknown function.
 
     0.717
SFB53475.1
Putative heme-binding domain-containing protein.
  
     0.713
SFB55268.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
     0.709
SFB09664.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
     0.686
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.