Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA87227.1 | SFB19828.1 | SAMN04489723_102103 | SAMN04489723_105219 | Trehalose 6-phosphate synthase/phosphatase. | 1,4-alpha-glucan branching enzyme. | 0.925 |
SFA87227.1 | SFB30191.1 | SAMN04489723_102103 | SAMN04489723_10714 | Trehalose 6-phosphate synthase/phosphatase. | CBS domain-containing protein. | 0.866 |
SFA87227.1 | SFB41648.1 | SAMN04489723_102103 | SAMN04489723_109142 | Trehalose 6-phosphate synthase/phosphatase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.685 |
SFA87227.1 | SFB41677.1 | SAMN04489723_102103 | SAMN04489723_109144 | Trehalose 6-phosphate synthase/phosphatase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.634 |
SFB19828.1 | SFA87227.1 | SAMN04489723_105219 | SAMN04489723_102103 | 1,4-alpha-glucan branching enzyme. | Trehalose 6-phosphate synthase/phosphatase. | 0.925 |
SFB19828.1 | SFB30191.1 | SAMN04489723_105219 | SAMN04489723_10714 | 1,4-alpha-glucan branching enzyme. | CBS domain-containing protein. | 0.651 |
SFB19828.1 | SFB41648.1 | SAMN04489723_105219 | SAMN04489723_109142 | 1,4-alpha-glucan branching enzyme. | Glycosyltransferase involved in cell wall bisynthesis. | 0.598 |
SFB19828.1 | SFB41677.1 | SAMN04489723_105219 | SAMN04489723_109144 | 1,4-alpha-glucan branching enzyme. | Glycosyltransferase involved in cell wall bisynthesis. | 0.598 |
SFB30191.1 | SFA87227.1 | SAMN04489723_10714 | SAMN04489723_102103 | CBS domain-containing protein. | Trehalose 6-phosphate synthase/phosphatase. | 0.866 |
SFB30191.1 | SFB19828.1 | SAMN04489723_10714 | SAMN04489723_105219 | CBS domain-containing protein. | 1,4-alpha-glucan branching enzyme. | 0.651 |
SFB30191.1 | SFB41648.1 | SAMN04489723_10714 | SAMN04489723_109142 | CBS domain-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.534 |
SFB30191.1 | SFB41677.1 | SAMN04489723_10714 | SAMN04489723_109144 | CBS domain-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.598 |
SFB41589.1 | SFB41619.1 | SAMN04489723_109138 | SAMN04489723_109140 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Heparinase II/III N-terminus. | 0.749 |
SFB41589.1 | SFB41635.1 | SAMN04489723_109138 | SAMN04489723_109141 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Predicted dehydrogenase. | 0.741 |
SFB41589.1 | SFB41648.1 | SAMN04489723_109138 | SAMN04489723_109142 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.535 |
SFB41589.1 | SFB41677.1 | SAMN04489723_109138 | SAMN04489723_109144 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.461 |
SFB41589.1 | SFB41695.1 | SAMN04489723_109138 | SAMN04489723_109145 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Hexapeptide repeat of succinyl-transferase. | 0.620 |
SFB41589.1 | SFB41739.1 | SAMN04489723_109138 | SAMN04489723_109148 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.461 |
SFB41619.1 | SFB41589.1 | SAMN04489723_109140 | SAMN04489723_109138 | Heparinase II/III N-terminus. | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.749 |
SFB41619.1 | SFB41635.1 | SAMN04489723_109140 | SAMN04489723_109141 | Heparinase II/III N-terminus. | Predicted dehydrogenase. | 0.892 |
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