STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB39927.1Thiol-disulfide isomerase or thioredoxin. (559 aa)    
Predicted Functional Partners:
msrA-3
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.960
SFB39915.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.858
SFA71852.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 0.759
SFB11984.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 0.759
SFB40850.1
Protein of unknown function.
   
 0.755
SFA80960.1
Hydroxyacylglutathione hydrolase.
 
 
 0.720
merA
Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 0.706
SFA78416.1
Thiol:disulfide interchange protein DsbD.
  
 
 0.695
SFB54252.1
Hypothetical protein.
  
 
 0.695
SFB39899.1
SusD family protein.
 
     0.674
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.